STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK51762.1Membrane protein. (435 aa)    
Predicted Functional Partners:
lolD-2
Lipoprotein-releasing system ATP-binding protein LolD 2.
 
 
 0.935
CRK49329.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.634
CRK53505.1
Lipoprotein.
 
 
 0.544
CRK54211.1
ABC transporter transmembrane protein.
  
 
 0.510
lolD
Outer membrane-specific lipoprotein transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 
 0.502
CRK49909.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.502
CRK51414.1
ABC transporter, ATP-binding protein.
  
 
 0.502
bceA
Bacitracin ABC efflux transporter (ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 
 0.502
CRK49413.1
ABC transporter ATPase.
  
 
 0.496
CRK51764.1
Putative glycosyltransferase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.
       0.489
Your Current Organism:
Rhodococcus sp. RD62
NCBI taxonomy Id: 260936
Other names: R. sp. RD6.2, Rhodococcus sp. RD6.2
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