STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcrAMitomycin radical oxidase. (415 aa)    
Predicted Functional Partners:
qcrC
Ubiquinol-cytochrome c reductase cytochrome c subunit.
   
 0.821
CRK52050.1
Hypothetical protein; No homology to any previously reported sequences.
       0.762
etfB
Electron transfer flavoprotein subunit beta.
  
 
 0.743
etfA
Electron transfer flavoprotein subunit alpha.
  
 
 0.742
CRK52052.1
Endoribonuclease L-PSP.
 
     0.690
CRK53613.1
Glutamine cyclotransferase.
    
   0.688
katE
Catalase 2; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.674
mftD
Putative mycofactocin system heme/flavin oxidoreductase MftD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.671
CRK54414.1
Lactate 2-monooxygenase.
  
 0.671
CRK50401.1
Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
    
 0.669
Your Current Organism:
Rhodococcus sp. RD62
NCBI taxonomy Id: 260936
Other names: R. sp. RD6.2, Rhodococcus sp. RD6.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.