STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK52183.1Hydrolase or acyltransferase (Alpha/beta hydrolase superfamily)-like protein. (311 aa)    
Predicted Functional Partners:
CRK54364.1
Polyketide synthase.
  
 0.781
CRK50539.1
Non-ribosomal peptide synthetase.
   
 0.776
CRK50562.1
Hypothetical protein; No homology to any previously reported sequences.
   
 0.771
CRK51135.1
Non-ribosomal peptide synthetase.
   
 0.771
CRK52520.1
Non-ribosomal peptide synthetase.
   
 0.758
CRK52797.1
Non-ribosomal peptide synthetase (fragment).
   
 0.758
CRK49180.1
Fatty acid synthase.
  
 
 0.720
CRK52780.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the binding-protein-dependent transport system permease family.
    
  0.658
CRK52786.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the binding-protein-dependent transport system permease family.
    
  0.658
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
  0.599
Your Current Organism:
Rhodococcus sp. RD62
NCBI taxonomy Id: 260936
Other names: R. sp. RD6.2, Rhodococcus sp. RD6.2
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