STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK52637.1Protein kinase/ LuxR family transcriptional regulator. (778 aa)    
Predicted Functional Partners:
hspX
Alpha-crystallin; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.689
ubiE
Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
       0.613
mgtA
GDP-mannose-dependent alpha-mannosyltransferase.
       0.550
CRK53660.1
Transcriptional regulator.
 
  
 0.506
CRK51022.1
Transcriptional activator domain-containing protein.
 
  
 0.504
CRK53230.1
Forkhead domain-containing protein.
 
  
 0.487
CRK52639.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.467
CRK52638.1
Hydrolase.
       0.455
CRK51038.1
SARP family transcriptional regulator fused with ATPase domain.
 
  
 0.450
CRK50421.1
Cytidylyltransferase.
  
    0.448
Your Current Organism:
Rhodococcus sp. RD62
NCBI taxonomy Id: 260936
Other names: R. sp. RD6.2, Rhodococcus sp. RD6.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.