STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK52761.1Transcriptional regulator. (557 aa)    
Predicted Functional Partners:
yngI
Putative acetoacetyl-CoA synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.846
CRK49475.1
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.722
yhjE-2
Inner membrane metabolite transport protein YhjE.
       0.480
CRK52732.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.431
mftC
Putative mycofactocin radical SAM maturase MftC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.416
CRK52721.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.413
Your Current Organism:
Rhodococcus sp. RD62
NCBI taxonomy Id: 260936
Other names: R. sp. RD6.2, Rhodococcus sp. RD6.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.