STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK52832.1Transcriptional regulator. (266 aa)    
Predicted Functional Partners:
CRK52443.1
Urea carboxylase.
  
 
  0.817
CRK52967.1
Allophanate hydrolase.
  
 
  0.817
CRK53781.1
IclR family transcriptional regulator.
  
     0.749
CRK54129.1
IclR family transcriptional regulator.
  
     0.691
CRK49383.1
Transcriptional regulator.
  
     0.639
hutH
Histidine ammonia-lyase (histidase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.550
CRK52831.1
NAD-specific glutamate dehydrogenase (fragment).
       0.542
CRK50809.1
IclR family transcriptional regulator.
  
     0.530
hutI
Imidazolonepropionase.
 
  
 0.505
CRK52833.1
Transcriptional regulator, AraC family.
  
    0.464
Your Current Organism:
Rhodococcus sp. RD62
NCBI taxonomy Id: 260936
Other names: R. sp. RD6.2, Rhodococcus sp. RD6.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.