Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRK53156.1 | CRK53157.1 | RHCRD62_50359 | RHCRD62_50360 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | FAD-dependent oxidoreductase. | 0.853 |
CRK53156.1 | dagK | RHCRD62_50359 | RHCRD62_50361 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Diacylglycerol kinase. | 0.755 |
CRK53156.1 | glpD-2 | RHCRD62_50359 | RHCRD62_50358 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Glycerol-3-phosphate dehydrogenase 1; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.911 |
CRK53157.1 | CRK53156.1 | RHCRD62_50360 | RHCRD62_50359 | FAD-dependent oxidoreductase. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.853 |
CRK53157.1 | CRK53613.1 | RHCRD62_50360 | RHCRD62_60380 | FAD-dependent oxidoreductase. | Glutamine cyclotransferase. | 0.688 |
CRK53157.1 | CRK54414.1 | RHCRD62_50360 | RHCRD62_90093 | FAD-dependent oxidoreductase. | Lactate 2-monooxygenase. | 0.671 |
CRK53157.1 | dagK | RHCRD62_50360 | RHCRD62_50361 | FAD-dependent oxidoreductase. | Diacylglycerol kinase. | 0.965 |
CRK53157.1 | etfA | RHCRD62_50360 | RHCRD62_80044 | FAD-dependent oxidoreductase. | Electron transfer flavoprotein subunit alpha. | 0.742 |
CRK53157.1 | etfB | RHCRD62_50360 | RHCRD62_80043 | FAD-dependent oxidoreductase. | Electron transfer flavoprotein subunit beta. | 0.743 |
CRK53157.1 | glpD-2 | RHCRD62_50360 | RHCRD62_50358 | FAD-dependent oxidoreductase. | Glycerol-3-phosphate dehydrogenase 1; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.841 |
CRK53157.1 | katE | RHCRD62_50360 | RHCRD62_20607 | FAD-dependent oxidoreductase. | Catalase 2; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.674 |
CRK53157.1 | mftD | RHCRD62_50360 | RHCRD62_40610 | FAD-dependent oxidoreductase. | Putative mycofactocin system heme/flavin oxidoreductase MftD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.671 |
CRK53157.1 | qcrC | RHCRD62_50360 | RHCRD62_30500 | FAD-dependent oxidoreductase. | Ubiquinol-cytochrome c reductase cytochrome c subunit. | 0.821 |
CRK53613.1 | CRK53157.1 | RHCRD62_60380 | RHCRD62_50360 | Glutamine cyclotransferase. | FAD-dependent oxidoreductase. | 0.688 |
CRK54414.1 | CRK53157.1 | RHCRD62_90093 | RHCRD62_50360 | Lactate 2-monooxygenase. | FAD-dependent oxidoreductase. | 0.671 |
CRK54414.1 | katE | RHCRD62_90093 | RHCRD62_20607 | Lactate 2-monooxygenase. | Catalase 2; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.642 |
CRK54414.1 | mftD | RHCRD62_90093 | RHCRD62_40610 | Lactate 2-monooxygenase. | Putative mycofactocin system heme/flavin oxidoreductase MftD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.901 |
dagK | CRK53156.1 | RHCRD62_50361 | RHCRD62_50359 | Diacylglycerol kinase. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.755 |
dagK | CRK53157.1 | RHCRD62_50361 | RHCRD62_50360 | Diacylglycerol kinase. | FAD-dependent oxidoreductase. | 0.965 |
dagK | glpD-2 | RHCRD62_50361 | RHCRD62_50358 | Diacylglycerol kinase. | Glycerol-3-phosphate dehydrogenase 1; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.934 |
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