STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcAGlycolate permease GlcA; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (537 aa)    
Predicted Functional Partners:
mftD
Putative mycofactocin system heme/flavin oxidoreductase MftD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.747
CRK54414.1
Lactate 2-monooxygenase.
 
  
 0.724
lutB
Component of an iron-sulfur oxidase; Function of homologous gene experimentally demonstrated in an other organism; putative enzyme.
 
  
 0.687
CRK50781.1
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.591
CRK50768.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.553
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
 
  
 0.522
lutA
Iron-sulfur oxidase component; Function of homologous gene experimentally demonstrated in an other organism; putative enzyme.
 
  
 0.510
fruA
PTS system fructose-specific EIIABC component (Includes: Fructose-specific phosphotransferase enzyme IIA component; Fructose-specific phosphotransferase enzyme IIB component; Fructose permease IIC component).
     
 0.501
CRK53262.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.498
CRK53964.1
L-lactate utilization lutc protein.
 
  
 0.488
Your Current Organism:
Rhodococcus sp. RD62
NCBI taxonomy Id: 260936
Other names: R. sp. RD6.2, Rhodococcus sp. RD6.2
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.