Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRK49656.1 | dkgA | RHCRD62_10511 | RHCRD62_60425 | SMP-30/gluconolaconase/LRE domain-containing protein. | 2,5-diketo-D-gluconate reductase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.656 |
CRK49656.1 | glpK | RHCRD62_10511 | RHCRD62_110025 | SMP-30/gluconolaconase/LRE domain-containing protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.408 |
CRK50586.1 | dkgA | RHCRD62_20025 | RHCRD62_60425 | Aldo-keto reductase. | 2,5-diketo-D-gluconate reductase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.696 |
CRK51028.1 | dkgA | RHCRD62_20467 | RHCRD62_60425 | Oxidoreductase. | 2,5-diketo-D-gluconate reductase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.721 |
CRK52132.1 | dkgA | RHCRD62_40019 | RHCRD62_60425 | Aldo-keto reductase. | 2,5-diketo-D-gluconate reductase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.698 |
CRK53096.1 | CRK54338.1 | RHCRD62_50299 | RHCRD62_90017 | Cytochrome P450. | Unspecific monooxygenase; Belongs to the cytochrome P450 family. | 0.652 |
CRK53096.1 | dkgA | RHCRD62_50299 | RHCRD62_60425 | Cytochrome P450. | 2,5-diketo-D-gluconate reductase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.667 |
CRK53096.1 | metH | RHCRD62_50299 | RHCRD62_20496 | Cytochrome P450. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.832 |
CRK53265.1 | dkgA | RHCRD62_60032 | RHCRD62_60425 | Gluconolactonase. | 2,5-diketo-D-gluconate reductase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.656 |
CRK53265.1 | glpK | RHCRD62_60032 | RHCRD62_110025 | Gluconolactonase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.408 |
CRK53657.1 | dkgA | RHCRD62_60424 | RHCRD62_60425 | ABC transporter ATPase. | 2,5-diketo-D-gluconate reductase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.697 |
CRK54338.1 | CRK53096.1 | RHCRD62_90017 | RHCRD62_50299 | Unspecific monooxygenase; Belongs to the cytochrome P450 family. | Cytochrome P450. | 0.652 |
CRK54338.1 | dkgA | RHCRD62_90017 | RHCRD62_60425 | Unspecific monooxygenase; Belongs to the cytochrome P450 family. | 2,5-diketo-D-gluconate reductase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.667 |
CRK54338.1 | metH | RHCRD62_90017 | RHCRD62_20496 | Unspecific monooxygenase; Belongs to the cytochrome P450 family. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.832 |
dkgA | CRK49656.1 | RHCRD62_60425 | RHCRD62_10511 | 2,5-diketo-D-gluconate reductase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | SMP-30/gluconolaconase/LRE domain-containing protein. | 0.656 |
dkgA | CRK50586.1 | RHCRD62_60425 | RHCRD62_20025 | 2,5-diketo-D-gluconate reductase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Aldo-keto reductase. | 0.696 |
dkgA | CRK51028.1 | RHCRD62_60425 | RHCRD62_20467 | 2,5-diketo-D-gluconate reductase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Oxidoreductase. | 0.721 |
dkgA | CRK52132.1 | RHCRD62_60425 | RHCRD62_40019 | 2,5-diketo-D-gluconate reductase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Aldo-keto reductase. | 0.698 |
dkgA | CRK53096.1 | RHCRD62_60425 | RHCRD62_50299 | 2,5-diketo-D-gluconate reductase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Cytochrome P450. | 0.667 |
dkgA | CRK53265.1 | RHCRD62_60425 | RHCRD62_60032 | 2,5-diketo-D-gluconate reductase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Gluconolactonase. | 0.656 |
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