STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK54168.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (196 aa)    
Predicted Functional Partners:
ygiC
Putative acid--amine ligase YgiC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.956
CRK54170.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.928
CRK50491.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.702
CRK50615.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.649
CRK51609.1
Putative TetR family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.583
CRK51285.1
FAD dependent oxidoreductase.
  
     0.568
acyP
Acylphosphatase.
       0.565
CRK54165.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.551
CRK51478.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.544
CRK53820.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.533
Your Current Organism:
Rhodococcus sp. RD62
NCBI taxonomy Id: 260936
Other names: R. sp. RD6.2, Rhodococcus sp. RD6.2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.