STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A3K91_0035Lipase; Pfam:pfam12697 Alpha/beta hydrolase family. (317 aa)    
Predicted Functional Partners:
A3K91_1453
Bis(5'-nucleosyl)-tetraphosphatase; Pfam:pfam00149 Calcineurin-like phosphoesterase.
    
  0.594
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.524
A3K91_1272
Hypothetical protein; Pfam:pfam12796 Ankyrin repeats (3 copies).
 
 0.458
A3K91_1234
Pfam:pfam12697 Alpha/beta hydrolase family.
  
   
 0.457
A3K91_2329
Pfam:pfam01553 Acyltransferase.
  
 
 0.414
A3K91_0171
Pfam:pfam00487 Fatty acid desaturase.
  
   
 0.403
Your Current Organism:
Psychrobacter alimentarius
NCBI taxonomy Id: 261164
Other names: DSM 16065, JCM 12315, KCTC 12186, P. alimentarius, Psychrobacter alimentarius Yoon et al. 2005, strain JG-100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.