STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A3K91_0227Hypothetical protein. (91 aa)    
Predicted Functional Partners:
A3K91_0228
Hypothetical protein.
       0.634
A3K91_0226
Hypothetical protein; Pfam:pfam08238 Sel1 repeat.
       0.542
A3K91_0229
Hypothetical protein.
       0.527
A3K91_0230
Hypothetical protein; Pfam:pfam05488 PAAR motif.
       0.527
A3K91_0225
Pfam:pfam07007 Protein of unknown function (DUF1311).
       0.404
Your Current Organism:
Psychrobacter alimentarius
NCBI taxonomy Id: 261164
Other names: DSM 16065, JCM 12315, KCTC 12186, P. alimentarius, Psychrobacter alimentarius Yoon et al. 2005, strain JG-100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.