STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A3K91_0429Type IV fimbrial biogenesis protein FimT. (211 aa)    
Predicted Functional Partners:
A3K91_0301
Type IV fimbrial biogenesis protein PilV.
 
  
 0.683
A3K91_0302
Type IV fimbrial biogenesis protein PilW.
 
  
 0.570
A3K91_0304
Pilus assembly protein PilY.
 
  
 0.566
A3K91_0305
Pilus assembly protein PilE; Pfam:pfam13544 Type IV pilin N-term methylation site GFxxxE.
 
  
 0.545
A3K91_2419
Pfam:pfam04351 Pilus assembly protein, PilP.
  
  
 0.527
A3K91_1000
Pfam:pfam13488 Glycine zipper.
  
     0.515
A3K91_1494
Pfam:pfam08291 Peptidase M15.
  
     0.515
A3K91_0399
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.511
A3K91_2166
Pfam:pfam01882 Protein of unknown function DUF58.
  
     0.511
A3K91_1831
DNA internalization-related competence protein ComEC/Rec2; Pfam:pfam03772 Competence protein.
 
   
 0.509
Your Current Organism:
Psychrobacter alimentarius
NCBI taxonomy Id: 261164
Other names: DSM 16065, JCM 12315, KCTC 12186, P. alimentarius, Psychrobacter alimentarius Yoon et al. 2005, strain JG-100
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