STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A3K91_0649Thiol-disulfide oxidoreductase DCC; Pfam:pfam04134 Protein of unknown function, DUF393. (146 aa)    
Predicted Functional Partners:
A3K91_0650
Pfam:pfam13781 DoxX-like family.
 
    0.874
A3K91_0651
DNA topology modulation protein; Pfam:pfam13207 AAA domain.
       0.527
A3K91_2468
Hypothetical protein; Pfam:pfam06940 Domain of unknown function (DUF1287).
 
     0.416
Your Current Organism:
Psychrobacter alimentarius
NCBI taxonomy Id: 261164
Other names: DSM 16065, JCM 12315, KCTC 12186, P. alimentarius, Psychrobacter alimentarius Yoon et al. 2005, strain JG-100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.