STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A3K91_15933-oxoadipate enol-lactonase; Pfam:pfam12697 Alpha/beta hydrolase family. (259 aa)    
Predicted Functional Partners:
A3K91_1866
Pfam:pfam02627 Carboxymuconolactone decarboxylase family.
 
 0.994
A3K91_1582
Pfam:pfam02426 Muconolactone delta-isomerase.
 
 
 0.969
A3K91_1591
3-oxoadipate CoA-transferase subunit B; Pfam:pfam01144 Coenzyme A transferase.
  
 
 0.953
A3K91_1590
3-oxoadipate CoA-transferase alpha subunit; Pfam:pfam01144 Coenzyme A transferase.
  
 
 0.947
A3K91_1237
Pfam:pfam02627 Carboxymuconolactone decarboxylase family.
 
 
 0.940
A3K91_1583
Catechol 1,2-dioxygenase; Pfam:pfam00775 Dioxygenase.
 
   
 0.796
A3K91_1592
3-oxoadipyl CoA thiolase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.712
A3K91_1588
Pfam:pfam00106 short chain dehydrogenase.
 
 
 0.699
A3K91_1581
Pfam:pfam02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain.
 
   
 0.694
A3K91_1586
Benzoate 1,2-dioxygenase, ferredoxin reductase component; Pfam:pfam00175 Oxidoreductase NAD-binding domain.
 
  
 0.660
Your Current Organism:
Psychrobacter alimentarius
NCBI taxonomy Id: 261164
Other names: DSM 16065, JCM 12315, KCTC 12186, P. alimentarius, Psychrobacter alimentarius Yoon et al. 2005, strain JG-100
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