STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
mdcB2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family. (295 aa)    
Predicted Functional Partners:
mdcC
Malonate decarboxylase acyl carrier protein; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.
 
  
 0.984
A3K91_1688
Putative malonate decarboxylase, subunit E; Pfam:pfam10620 Phosphoribosyl-dephospho-CoA transferase MdcG.
 
  
  0.979
A3K91_1690
Putative malonate decarboxylase, beta subunit; Pfam:pfam01039 Carboxyl transferase domain.
 
  
 0.939
A3K91_1686
malonyl-CoA ACP transacylase; Pfam:pfam00698 Acyl transferase domain.
 
    0.933
A3K91_1692
Malonate decarboxylase, alpha subunit.
 
  
 0.930
A3K91_1694
Pfam:pfam03817 Malonate transporter MadL subunit.
 
    0.901
A3K91_1689
Pfam:pfam06833 Malonate decarboxylase gamma subunit (MdcE).
 
     0.896
A3K91_1693
Pfam:pfam03818 Malonate/sodium symporter MadM subunit.
 
     0.839
A3K91_1706
Pfam:pfam03328 HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.792
A3K91_1685
Hypothetical protein; Pfam:pfam01925 Sulfite exporter TauE/SafE.
       0.598
Your Current Organism:
Psychrobacter alimentarius
NCBI taxonomy Id: 261164
Other names: DSM 16065, JCM 12315, KCTC 12186, P. alimentarius, Psychrobacter alimentarius Yoon et al. 2005, strain JG-100
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