STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A3K91_2136Pfam:pfam13420 Acetyltransferase (GNAT) domain. (167 aa)    
Predicted Functional Partners:
A3K91_0630
Pfam:pfam00155 Aminotransferase class I and II.
    
  0.900
katG
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
  0.900
hisC
Pfam:pfam00155 Aminotransferase class I and II; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
  0.900
A3K91_1203
Pfam:pfam00155 Aminotransferase class I and II.
    
  0.900
A3K91_1206
Phenylalanine-4-hydroxylase; Pfam:pfam00351 Biopterin-dependent aromatic amino acid hydroxylase.
     
  0.900
A3K91_1890
Pfam:pfam00155 Aminotransferase class I and II.
    
  0.900
hisC-2
Pfam:pfam00155 Aminotransferase class I and II; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
  0.900
A3K91_1175
Chorismate mutase I; Pfam:pfam00800 Prephenate dehydratase.
    
  0.824
A3K91_2135
Pfam:pfam00583 Acetyltransferase (GNAT) family.
 
 
 0.642
A3K91_2728
Histidine kinase; Pfam:pfam00072 Response regulator receiver domain.
  
 
 0.486
Your Current Organism:
Psychrobacter alimentarius
NCBI taxonomy Id: 261164
Other names: DSM 16065, JCM 12315, KCTC 12186, P. alimentarius, Psychrobacter alimentarius Yoon et al. 2005, strain JG-100
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