AEJ01680.1 protein (Nitrosomonas sp. Is79A3)

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AEJ01680.1

KEGG: nit:NAL212_0866 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4. (134 aa)

Predicted Functional Partners:

rplS

0.905

rplQ

0.881

rpmB

0.874

AEJ01977.1

0.873

rpmH

0.871

rplM

0.865

rplN

0.865

rplV

0.864

rplT

0.863

rpmI

0.862

Your Current Organism:

Nitrosomonas sp. Is79A3

NCBI taxonomy Id: 261292
Other names: N. sp. Is79A3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AEJ01680.1	AEJ01977.1	Nit79A3_1882	Nit79A3_2194	KEGG: nit:NAL212_0866 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4.	Hsp33 protein; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.	0.873
AEJ01680.1	rplM	Nit79A3_1882	Nit79A3_0691	KEGG: nit:NAL212_0866 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.865
AEJ01680.1	rplN	Nit79A3_1882	Nit79A3_2811	KEGG: nit:NAL212_0866 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4.	Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.865
AEJ01680.1	rplQ	Nit79A3_1882	Nit79A3_2794	KEGG: nit:NAL212_0866 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4.	TIGRFAM: Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; KEGG: nit:NAL212_1161 50S ribosomal protein L17; PFAM: Ribosomal protein L17.	0.881
AEJ01680.1	rplS	Nit79A3_1882	Nit79A3_0562	KEGG: nit:NAL212_0866 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.905
AEJ01680.1	rplT	Nit79A3_1882	Nit79A3_0830	KEGG: nit:NAL212_0866 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.863
AEJ01680.1	rplV	Nit79A3_1882	Nit79A3_2816	KEGG: nit:NAL212_0866 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4.	Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.864
AEJ01680.1	rpmB	Nit79A3_1882	Nit79A3_2616	KEGG: nit:NAL212_0866 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4.	TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: nit:NAL212_1451 50S ribosomal protein L28; PFAM: Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.874
AEJ01680.1	rpmH	Nit79A3_1882	Nit79A3_0420	KEGG: nit:NAL212_0866 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4.	TIGRFAM: Ribosomal protein L34; HAMAP: 50S ribosomal protein L34; KEGG: nit:NAL212_2719 50S ribosomal protein L34; PFAM: Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.871
AEJ01680.1	rpmI	Nit79A3_1882	Nit79A3_0829	KEGG: nit:NAL212_0866 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4.	TIGRFAM: Ribosomal protein L35; HAMAP: Ribosomal protein L35; KEGG: nit:NAL212_2131 50S ribosomal protein L35; PFAM: Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.862
AEJ01977.1	AEJ01680.1	Nit79A3_2194	Nit79A3_1882	Hsp33 protein; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.	KEGG: nit:NAL212_0866 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4.	0.873
rplM	AEJ01680.1	Nit79A3_0691	Nit79A3_1882	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	KEGG: nit:NAL212_0866 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4.	0.865
rplM	rplN	Nit79A3_0691	Nit79A3_2811	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.998
rplM	rplQ	Nit79A3_0691	Nit79A3_2794	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; KEGG: nit:NAL212_1161 50S ribosomal protein L17; PFAM: Ribosomal protein L17.	0.996
rplM	rplS	Nit79A3_0691	Nit79A3_0562	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.995
rplM	rplT	Nit79A3_0691	Nit79A3_0830	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.997
rplM	rplV	Nit79A3_0691	Nit79A3_2816	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.999
rplM	rpmB	Nit79A3_0691	Nit79A3_2616	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: nit:NAL212_1451 50S ribosomal protein L28; PFAM: Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.993
rplM	rpmH	Nit79A3_0691	Nit79A3_0420	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: Ribosomal protein L34; HAMAP: 50S ribosomal protein L34; KEGG: nit:NAL212_2719 50S ribosomal protein L34; PFAM: Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.990
rplM	rpmI	Nit79A3_0691	Nit79A3_0829	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: Ribosomal protein L35; HAMAP: Ribosomal protein L35; KEGG: nit:NAL212_2131 50S ribosomal protein L35; PFAM: Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.993