STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ02403.1Regulatory protein MerR; PFAM: HTH transcriptional regulator, MerR; KEGG: nit:NAL212_1431 hypothetical protein. (64 aa)    
Predicted Functional Partners:
AEJ02404.1
Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: nit:NAL212_1430 hypothetical protein; Belongs to the 'phage' integrase family.
       0.800
AEJ02402.1
KEGG: nit:NAL212_1432 hypothetical protein.
       0.789
AEJ02405.1
PFAM: Protein of unknown function DUF2136; KEGG: nit:NAL212_1429 hypothetical protein.
       0.651
AEJ02406.1
Transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; KEGG: neu:NE1587 helix-hairpin-helix DNA-binding motif-containing protein.
       0.600
AEJ02401.1
KEGG: nit:NAL212_1433 hypothetical protein.
       0.589
AEJ02400.1
PFAM: Replication endonuclease, probable, phage; KEGG: nit:NAL212_1434 replication protein A.
       0.558
Your Current Organism:
Nitrosomonas sp. Is79A3
NCBI taxonomy Id: 261292
Other names: N. sp. Is79A3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.