STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ02719.1LemA family protein; PFAM: LemA; KEGG: nit:NAL212_2863 LemA family protein. (190 aa)    
Predicted Functional Partners:
AEJ02718.1
KEGG: nit:NAL212_2862 E3 ubiquitin ligase.
 
    0.929
AEJ01971.1
PFAM: Protein of unknown function DUF477; KEGG: nit:NAL212_2015 hypothetical protein.
 
    0.648
AEJ02720.1
KEGG: nit:NAL212_2864 hypothetical protein.
       0.488
Your Current Organism:
Nitrosomonas sp. Is79A3
NCBI taxonomy Id: 261292
Other names: N. sp. Is79A3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.