STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ02888.1PFAM: Ankyrin repeat; KEGG: nit:NAL212_2632 ankyrin. (386 aa)    
Predicted Functional Partners:
AEJ01186.1
KEGG: gca:Galf_1581 respiratory-chain NADH dehydrogenase domain 51 kDa subunit; manually curated; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding.
   
 
 0.915
AEJ00463.1
PFAM: EF-Hand domain; KEGG: gca:Galf_2016 EF-Hand, calmodulin.
    
 0.883
AEJ02291.1
TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated region; DNA/RNA helicase, C-terminal; Domain of unknown function DUF1605; KEGG: nit:NAL212_2554 ATP-dependent helicase HrpA; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal.
    
 0.852
AEJ02891.1
PFAM: Carbohydrate kinase, FGGY, N-terminal; KEGG: nit:NAL212_2629 glycerol kinase.
   
 0.852
AEJ01425.1
PFAM: Sulphate transporter; KEGG: nit:NAL212_0858 sulfate transporter.
    
 
 0.839
AEJ02854.1
Cytochrome b/b6 domain-containing protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
  0.822
AEJ02889.1
PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: nit:NAL212_2631 glycerophosphoryl diester phosphodiesterase.
    
 0.800
AEJ02890.1
PFAM: FAD dependent oxidoreductase; KEGG: nit:NAL212_2630 glycerol-3-phosphate dehydrogenase.
       0.772
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.769
AEJ01550.1
PFAM: Sulphatase-modifying factor; KEGG: mms:mma_1908 hypothetical protein.
 
 
 0.749
Your Current Organism:
Nitrosomonas sp. Is79A3
NCBI taxonomy Id: 261292
Other names: N. sp. Is79A3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.