STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
murRPhosphosugar-binding transcriptional regulator. (254 aa)    
Predicted Functional Partners:
ptsG
PTS system glucose subfamily transporter subunit IIA.
 
 
 0.940
bglF_1
PTS system beta-glucoside-specific transporter subunit IIABC.
  
 
 0.928
porA_1
Pyruvate-flavodoxin oxidoreductase.
  
 
  0.865
bglF_2
PTS system%2C trehalose-specific IIBC component.
  
 
 0.814
manP
PTS system transporter subunit IIABC.
 
   
 0.736
gatY
Tagatose-bisphosphate aldolase.
 
  
 0.587
tagK
Tagatose (1)-phosphate-kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
   
 0.562
eda
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
 
  
 0.552
gmuF
Phosphomannose isomerase.
  
 
 0.542
fruA
PTS system transporter subunit IIBC.
     
 0.454
Your Current Organism:
Intestinibacter bartlettii
NCBI taxonomy Id: 261299
Other names: ATCC BAA-827, CCUG 48940, Clostridium bartlettii, Clostridium bartlettii Song et al. 2004, DSM 16795, I. bartlettii, Intestinibacter bartlettii (Song et al. 2004) Gerritsen et al. 2014, WAL 16138
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