STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
buk2_1Butyrate kinase; Belongs to the acetokinase family. (356 aa)    
Predicted Functional Partners:
pta
Phosphate butyryltransferase.
 
 0.996
ptb
Phosphate butyryltransferase.
 
 0.994
buk2_2
Butyrate kinase; Belongs to the acetokinase family.
  
  
 
0.781
bmrR_1
MerR family transcriptional regulator.
       0.682
acoA
acetoin:2%2C6-dichlorophenolindophenol oxidoreductase subunit alpha.
  
  
 0.665
porA_1
Pyruvate-flavodoxin oxidoreductase.
     
 0.598
pdhD
Carbon monoxide dehydrogenase/acetyl-CoA synthase complex%2C dihydrolipoyl dehydrogenase subunit.
  
    0.546
CUO55977.1
Indolepyruvate oxidoreductase subunit beta.
     
 0.522
iorA
Indolepyruvate oxidoreductase subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
       0.521
CUP15403.1
Glutamate dehydrogenase%2C NAD-specific; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
    0.472
Your Current Organism:
Intestinibacter bartlettii
NCBI taxonomy Id: 261299
Other names: ATCC BAA-827, CCUG 48940, Clostridium bartlettii, Clostridium bartlettii Song et al. 2004, DSM 16795, I. bartlettii, Intestinibacter bartlettii (Song et al. 2004) Gerritsen et al. 2014, WAL 16138
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