STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hssRTwo component transcriptional regulator%2C winged helix family. (224 aa)    
Predicted Functional Partners:
phoR4
Alkaline phosphatase synthesis sensor protein PhoR.
  0.978
resE9
Sensor histidine kinase ResE.
 0.937
divJ
Two-component histidine kinase.
 0.934
yycG_1
Two-component sensor histidine kinase.
 0.933
phoR_2
PAS/PAC sensor signal transduction histidine kinase.
 
 0.903
phoR_8
Histidine kinase.
 
  0.903
arlS_1
Putative two component regulator sensor histidine kinase transcriptional regulatory protein.
  0.895
phoR_4
Integral membrane sensor signal transduction histidine kinase.
  0.895
phoR_7
Two-component sensor histidine kinase.
  0.886
yycG_2
Two-component sensor histidine kinase.
  0.884
Your Current Organism:
Intestinibacter bartlettii
NCBI taxonomy Id: 261299
Other names: ATCC BAA-827, CCUG 48940, Clostridium bartlettii, Clostridium bartlettii Song et al. 2004, DSM 16795, I. bartlettii, Intestinibacter bartlettii (Song et al. 2004) Gerritsen et al. 2014, WAL 16138
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