STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO82577.1Stage III sporulation protein AA. (321 aa)    
Predicted Functional Partners:
spoIIIAC
Stage III sporulation protein AC.
 
  
 0.982
CUO82384.1
Stage iii sporulation protein ag.
 
  
 0.978
spoIIIAE
Stage III sporulation-related protein.
 
  
 0.965
CUO82546.1
Stage III sporulation protein AB.
 
  
 0.962
CUO82491.1
Stage III sporulation protein AD.
 
  
 0.958
spoIIIAH
Stage III sporulation protein AH.
 
  
 0.955
spoIVA
Stage IV sporulation protein A.
  
  
 0.880
CUO59393.1
Stage II sporulation protein P.
  
   
 0.862
spoIIID
Stage III sporulation protein D.
  
   
 0.861
CUP28922.1
Stage II sporulation protein.
  
  
 0.855
Your Current Organism:
Intestinibacter bartlettii
NCBI taxonomy Id: 261299
Other names: ATCC BAA-827, CCUG 48940, Clostridium bartlettii, Clostridium bartlettii Song et al. 2004, DSM 16795, I. bartlettii, Intestinibacter bartlettii (Song et al. 2004) Gerritsen et al. 2014, WAL 16138
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.