STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO90049.1Uncharacterised protein. (204 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.790
ygaD
Competence damage-inducible protein A; Belongs to the CinA family.
    
  0.782
CUP10466.1
S-layer protein.
  
 
 0.767
CUO78379.1
Lysophospholipase L1-like esterase.
   
 0.746
CUO86987.1
Platelet activating factor acetylhydrolase-like protein.
   
 0.746
entD_3
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain-containing protein.
   
 0.746
CUO51800.1
Copper amine oxidase-like protein.
  
    0.632
CUO82755.1
Calcium-chelating exported protein.
  
    0.632
cbhB
S-layer protein.
  
 
 0.608
CUO62754.1
Chitinase.
  
 0.597
Your Current Organism:
Intestinibacter bartlettii
NCBI taxonomy Id: 261299
Other names: ATCC BAA-827, CCUG 48940, Clostridium bartlettii, Clostridium bartlettii Song et al. 2004, DSM 16795, I. bartlettii, Intestinibacter bartlettii (Song et al. 2004) Gerritsen et al. 2014, WAL 16138
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.