STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srlA_2PTS system glucitol/sorbitol-specific transporter subunit IIC2. (173 aa)    
Predicted Functional Partners:
srlE_2
PTS system glucitol/sorbitol-specific transporter subunit IIBC.
 
 0.999
CUP30189.1
PTS system transporter subunit IIA.
 
 
  0.987
srlE_1
PTS system glucitol/sorbitol-specific transporter subunit IIBC.
 
 0.985
CUO96861.1
PTS system glucitol/sorbitol-specific transporter subunit IIA.
 
 
  0.974
CUO96961.1
Glucitol operon activator.
 
    0.930
fabG_3
Sorbitol-6-phosphate 2-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  0.897
licR_2
Transcriptional antiterminator BglG.
 
 
 0.823
CUP30206.1
Predicted homoserine dehydrogenase.
 
    0.813
ptsH
PTS system%2C phosphocarrier protein.
    
  0.752
licR_3
Transcription antiterminator.
 
    0.718
Your Current Organism:
Intestinibacter bartlettii
NCBI taxonomy Id: 261299
Other names: ATCC BAA-827, CCUG 48940, Clostridium bartlettii, Clostridium bartlettii Song et al. 2004, DSM 16795, I. bartlettii, Intestinibacter bartlettii (Song et al. 2004) Gerritsen et al. 2014, WAL 16138
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