STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ30170.1Hypothetical protein. (821 aa)    
Predicted Functional Partners:
SJZ30171.1
Hypothetical protein.
       0.784
SJZ31090.1
Hypothetical protein.
    
  0.764
SJZ32652.1
FlgD Ig-like domain-containing protein.
    
  0.764
SJZ36161.1
Hypothetical protein.
    
  0.764
SJZ44288.1
Ig-like domain (group 3).
    
  0.764
SJZ62114.1
Hypothetical protein.
    
  0.764
SJZ73796.1
Ig-like domain (group 3).
    
  0.764
SJZ49011.1
beta-N-acetylhexosaminidase.
    
  0.751
SJZ54199.1
beta-N-acetylhexosaminidase.
    
  0.751
SJZ30168.1
Hypothetical protein.
       0.678
Your Current Organism:
Treponema porcinum
NCBI taxonomy Id: 261392
Other names: ATCC BAA-908, CIP 108245, JCM 12342, T. porcinum, Treponema porcinum Nordhoff et al. 2005, Treponema sp. 14V28, strain 14V28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.