STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ54619.1Glycosyltransferase involved in cell wall bisynthesis. (380 aa)    
Predicted Functional Partners:
SJZ54719.1
Glycosyl transferase family 2.
 
 
  0.845
SJZ54703.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.843
SJZ61759.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.838
SJZ31592.1
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.837
SJZ54662.1
Capsular polysaccharide synthesis protein.
  
  
 0.814
SJZ54602.1
Transferase hexapeptide (six repeat-containing protein).
  
  
 0.790
SJZ54636.1
EpsG family protein.
       0.773
SJZ29595.1
Carbohydrate-binding module 48 (Isoamylase N-terminal domain).
   
 0.762
SJZ31565.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.702
SJZ54579.1
Hypothetical protein.
       0.664
Your Current Organism:
Treponema porcinum
NCBI taxonomy Id: 261392
Other names: ATCC BAA-908, CIP 108245, JCM 12342, T. porcinum, Treponema porcinum Nordhoff et al. 2005, Treponema sp. 14V28, strain 14V28
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