STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ61662.12-aminoethylphosphonate-pyruvate transaminase. (610 aa)    
Predicted Functional Partners:
SJZ61691.1
Phosphoenolpyruvate phosphomutase.
 
 
 0.993
SJZ61668.1
Phosphonopyruvate decarboxylase.
 
 
 0.989
SJZ29712.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 
  0.863
SJZ56278.1
Aspartate kinase.
    
 0.858
SJZ61741.1
iron(III) transport system substrate-binding protein.
 
  
 0.805
SJZ61729.1
iron(III) transport system permease protein.
 
     0.803
SJZ29556.1
FMN-dependent dehydrogenase.
  
 0.800
trpF
Indole-3-glycerol phosphate synthase; Belongs to the TrpF family.
    
  0.796
SJZ37930.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.717
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
  
 0.711
Your Current Organism:
Treponema porcinum
NCBI taxonomy Id: 261392
Other names: ATCC BAA-908, CIP 108245, JCM 12342, T. porcinum, Treponema porcinum Nordhoff et al. 2005, Treponema sp. 14V28, strain 14V28
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.