STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ62098.1Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (351 aa)    
Predicted Functional Partners:
SJZ39344.1
Galactokinase; Belongs to the GHMP kinase family.
 
 0.990
SJZ50822.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.932
SJZ47844.1
Putative hydrolase of the HAD superfamily.
  
 
  0.904
SJZ53995.1
Hexokinase.
     
 0.885
SJZ62185.1
RNA polymerase sigma factor for flagellar operon FliA; Belongs to the sigma-70 factor family.
  
    0.777
SJZ62114.1
Hypothetical protein.
     
 0.775
SJZ62142.1
Hypothetical protein.
       0.773
SJZ62166.1
Hypothetical protein.
       0.773
SJZ56007.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
 
  
 0.706
SJZ59046.1
Predicted dehydrogenase.
 
 
 0.704
Your Current Organism:
Treponema porcinum
NCBI taxonomy Id: 261392
Other names: ATCC BAA-908, CIP 108245, JCM 12342, T. porcinum, Treponema porcinum Nordhoff et al. 2005, Treponema sp. 14V28, strain 14V28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.