STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBAA_1842Putative dehydrogenase; Identified by match to protein family HMM PF01210; match to protein family HMM PF03446; match to protein family HMM PF03807. (317 aa)    
Predicted Functional Partners:
GBAA_3415
Conserved hypothetical protein; Identified by match to protein family HMM PF07336.
  
     0.677
GBAA_3564
FAD-binding monooxygenase, PheA/TfdB family; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494.
  
   
 0.572
GBAA_1940
Identified by match to protein family HMM PF02627.
  
  
 0.518
GBAA_2829
Carboxymuconolactone decarboxylase; Identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778.
  
  
 0.518
GBAA_1843
Hypothetical protein; Identified by Glimmer3; putative.
       0.506
GBAA_2410
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.475
GBAA_2860
Hydrolase, CocE/NonD family; Identified by match to protein family HMM PF02129; match to protein family HMM PF08530; match to protein family HMM TIGR00976.
  
     0.459
GBAA_2702
Conserved hypothetical protein.
  
   
 0.455
chi36
Extracellular exochitinase Chi36; Identified by match to protein family HMM PF00704; Belongs to the glycosyl hydrolase 18 family.
  
     0.451
GBAA_5695
Nitric-oxide synthase, oxygenase subunit; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.
  
     0.444
Your Current Organism:
Bacillus anthracis
NCBI taxonomy Id: 261594
Other names: B. anthracis str. 'Ames Ancestor', Bacillus anthracis str. 'Ames Ancestor', Bacillus anthracis str. Ames 0581, Bacillus anthracis str. Ames Ancestor
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.