STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBAA_3153Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF08664. (314 aa)    
Predicted Functional Partners:
GBAA_1802
Sensor histidine kinase; Identified by match to protein family HMM PF02518.
 
 0.983
GBAA_1803
Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF08664.
  
 
 
0.904
GBAA_2636
Sensor histidine kinase.
 
 
 0.896
GBAA_1662
Putative flagellar motor switch protein; Identified by match to protein family HMM PF01052; match to protein family HMM PF04509.
  
  
 0.792
GBAA_0548
Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.
  
 
 0.779
rbsB
Ribose ABC transporter, ribose-binding protein; Identified by match to protein family HMM PF00532.
  
 
 0.647
GBAA_2975
Putative sugar ABC transporter, sugar-binding protein.
  
 
 0.647
GBAA_1672
Putative flagellar protein FliS.
  
  
 0.561
GBAA_0575
Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743.
 
 
 0.552
GBAA_3291
Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02203; match to protein family HMM PF02743.
 
 
 0.545
Your Current Organism:
Bacillus anthracis
NCBI taxonomy Id: 261594
Other names: B. anthracis str. 'Ames Ancestor', Bacillus anthracis str. 'Ames Ancestor', Bacillus anthracis str. Ames 0581, Bacillus anthracis str. Ames Ancestor
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