STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBAA_4091Putative prophage LambdaBa02, major capsid protein; Identified by match to protein family HMM PF05065. (395 aa)    
Predicted Functional Partners:
GBAA_4093
Conserved hypothetical protein; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.
   
 
 0.834
GBAA_4092
Prophage LambdaBa02, Clp protease family protein; Identified by match to protein family HMM PF00574.
  
    0.788
GBAA_4088
Conserved hypothetical protein; Identified by match to protein family HMM PF06264; match to protein family HMM TIGR01563.
  
 
 0.751
GBAA_4089
Conserved hypothetical protein.
  
   0.716
GBAA_4086
Conserved hypothetical protein.
  
    0.649
GBAA_4085
Putative prophage LambdaBa02, major tail protein; Identified by match to protein family HMM TIGR01603.
  
    0.648
GBAA_4087
Conserved hypothetical protein; Identified by match to protein family HMM TIGR01725.
  
    0.623
GBAA_4094
Putative prophage LambdaBa02, terminase, large subunit; Identified by match to protein family HMM PF03354.
       0.613
GBAA_4090
Conserved domain protein.
       0.563
GBAA_4095
Conserved hypothetical protein; Identified by match to protein family HMM PF05119; match to protein family HMM TIGR01558.
       0.508
Your Current Organism:
Bacillus anthracis
NCBI taxonomy Id: 261594
Other names: B. anthracis str. 'Ames Ancestor', Bacillus anthracis str. 'Ames Ancestor', Bacillus anthracis str. Ames 0581, Bacillus anthracis str. Ames Ancestor
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.