Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBT37734.1 | SBT39574.1 | GA0070611_0301 | GA0070611_0955 | Phosphoglucomutase. | Isoamylase; Belongs to the glycosyl hydrolase 13 family. | 0.837 |
SBT37734.1 | SBT39576.1 | GA0070611_0301 | GA0070611_0956 | Phosphoglucomutase. | Maltooligosyl trehalose synthase. | 0.563 |
SBT37734.1 | SBT44116.1 | GA0070611_0301 | GA0070611_2570 | Phosphoglucomutase. | Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family. | 0.867 |
SBT37734.1 | glgB | GA0070611_0301 | GA0070611_0296 | Phosphoglucomutase. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.960 |
SBT37734.1 | glgC | GA0070611_0301 | GA0070611_0300 | Phosphoglucomutase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.982 |
SBT37734.1 | glgE | GA0070611_0301 | GA0070611_0297 | Phosphoglucomutase. | Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.622 |
SBT38095.1 | SBT39574.1 | GA0070611_0433 | GA0070611_0955 | Hypothetical protein. | Isoamylase; Belongs to the glycosyl hydrolase 13 family. | 0.664 |
SBT38095.1 | SBT39576.1 | GA0070611_0433 | GA0070611_0956 | Hypothetical protein. | Maltooligosyl trehalose synthase. | 0.651 |
SBT38095.1 | SBT44116.1 | GA0070611_0433 | GA0070611_2570 | Hypothetical protein. | Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family. | 0.951 |
SBT38095.1 | SBT46850.1 | GA0070611_0433 | GA0070611_3522 | Hypothetical protein. | Maltose alpha-D-glucosyltransferase/ alpha-amylase. | 0.781 |
SBT38095.1 | SBT51375.1 | GA0070611_0433 | GA0070611_5147 | Hypothetical protein. | Alpha-amylase. | 0.708 |
SBT38095.1 | SBT51708.1 | GA0070611_0433 | GA0070611_5301 | Hypothetical protein. | Alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family. | 0.708 |
SBT38095.1 | glgB | GA0070611_0433 | GA0070611_0296 | Hypothetical protein. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.902 |
SBT38095.1 | glgC | GA0070611_0433 | GA0070611_0300 | Hypothetical protein. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.583 |
SBT38095.1 | glgE | GA0070611_0433 | GA0070611_0297 | Hypothetical protein. | Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.708 |
SBT39574.1 | SBT37734.1 | GA0070611_0955 | GA0070611_0301 | Isoamylase; Belongs to the glycosyl hydrolase 13 family. | Phosphoglucomutase. | 0.837 |
SBT39574.1 | SBT38095.1 | GA0070611_0955 | GA0070611_0433 | Isoamylase; Belongs to the glycosyl hydrolase 13 family. | Hypothetical protein. | 0.664 |
SBT39574.1 | SBT39576.1 | GA0070611_0955 | GA0070611_0956 | Isoamylase; Belongs to the glycosyl hydrolase 13 family. | Maltooligosyl trehalose synthase. | 0.999 |
SBT39574.1 | SBT44116.1 | GA0070611_0955 | GA0070611_2570 | Isoamylase; Belongs to the glycosyl hydrolase 13 family. | Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family. | 0.798 |
SBT39574.1 | SBT46850.1 | GA0070611_0955 | GA0070611_3522 | Isoamylase; Belongs to the glycosyl hydrolase 13 family. | Maltose alpha-D-glucosyltransferase/ alpha-amylase. | 0.975 |
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