STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBT37878.1Carbohydrate binding domain-containing protein. (867 aa)    
Predicted Functional Partners:
SBT51381.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
  
  
  0.944
SBT46577.1
Cellulase/cellobiase CelA1; Manually curated; Belongs to the glycosyl hydrolase family 6.
  
  
0.917
SBT41892.1
Endoglucanase.
  
  
 
0.788
SBT37009.1
Processive endocellulase.
  
  
 
0.780
SBT43216.1
Endoglucanase.
  
 
 
0.771
SBT53509.1
Endoglucanase.
  
 
 
0.760
SBT41559.1
Exo-1,4-beta-glucosidase.
  
  
  0.718
SBT43411.1
Beta-xylosidase.
  
    0.700
SBT40308.1
Glycosyl hydrolase family 3 C-terminal domain-containing protein; Manually curated.
  
  
  0.677
SBT40261.1
Beta-glucosidase.
  
  
  0.656
Your Current Organism:
Micromonospora auratinigra
NCBI taxonomy Id: 261654
Other names: DSM 44815, JCM 12357, M. auratinigra, Micromonospora aurantionigra, Micromonospora auratinigra corrig. Thawai et al. 2004, Micromonospora sp. TT1-11, NBRC 101913, PCU 239, PCU:239, strain TT1-11
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