node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBT37884.1 | SBT39897.1 | GA0070611_0364 | GA0070611_1067 | ATP-dependent helicase HrpB. | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | 0.907 |
SBT37884.1 | SBT44425.1 | GA0070611_0364 | GA0070611_2685 | ATP-dependent helicase HrpB. | Small subunit ribosomal protein S1. | 0.962 |
SBT37884.1 | SBT47196.1 | GA0070611_0364 | GA0070611_3643 | ATP-dependent helicase HrpB. | Superfamily II DNA and RNA helicase. | 0.906 |
SBT37884.1 | SBT48060.1 | GA0070611_0364 | GA0070611_3939 | ATP-dependent helicase HrpB. | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | 0.894 |
SBT37884.1 | SBT53673.1 | GA0070611_0364 | GA0070611_6240 | ATP-dependent helicase HrpB. | Ribonuclease D. | 0.982 |
SBT37884.1 | rph | GA0070611_0364 | GA0070611_5738 | ATP-dependent helicase HrpB. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.896 |
SBT37884.1 | rpsD | GA0070611_0364 | GA0070611_3840 | ATP-dependent helicase HrpB. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.970 |
SBT37884.1 | rpsE | GA0070611_0364 | GA0070611_3851 | ATP-dependent helicase HrpB. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.897 |
SBT37884.1 | rpsK | GA0070611_0364 | GA0070611_3841 | ATP-dependent helicase HrpB. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.940 |
SBT37884.1 | rpsQ | GA0070611_0364 | GA0070611_3859 | ATP-dependent helicase HrpB. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.923 |
SBT39897.1 | SBT37884.1 | GA0070611_1067 | GA0070611_0364 | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | ATP-dependent helicase HrpB. | 0.907 |
SBT39897.1 | SBT44425.1 | GA0070611_1067 | GA0070611_2685 | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | Small subunit ribosomal protein S1. | 0.898 |
SBT39897.1 | SBT53673.1 | GA0070611_1067 | GA0070611_6240 | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | Ribonuclease D. | 0.852 |
SBT39897.1 | rph | GA0070611_1067 | GA0070611_5738 | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.828 |
SBT39897.1 | rpsD | GA0070611_1067 | GA0070611_3840 | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.907 |
SBT39897.1 | rpsE | GA0070611_1067 | GA0070611_3851 | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.889 |
SBT39897.1 | rpsK | GA0070611_1067 | GA0070611_3841 | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.878 |
SBT39897.1 | rpsQ | GA0070611_1067 | GA0070611_3859 | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.662 |
SBT44425.1 | SBT37884.1 | GA0070611_2685 | GA0070611_0364 | Small subunit ribosomal protein S1. | ATP-dependent helicase HrpB. | 0.962 |
SBT44425.1 | SBT39897.1 | GA0070611_2685 | GA0070611_1067 | Small subunit ribosomal protein S1. | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | 0.898 |