STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBT40365.1Putative peptidoglycan binding domain-containing protein. (1454 aa)    
Predicted Functional Partners:
SBT40362.1
Hypothetical protein.
 
     0.885
SBT40364.1
Hypothetical protein.
 
     0.869
SBT40360.1
Hypothetical protein.
 
     0.859
SBT40358.1
Hypothetical protein.
 
     0.848
SBT40357.1
Hypothetical protein.
 
     0.731
SBT51236.1
Alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
 
 0.656
SBT40176.1
Response regulator receiver domain.
  
     0.549
folE
GTP cyclohydrolase I.
    
 0.517
SBT48946.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
    
 0.504
SBT46822.1
Protein of unknown function (DUF2795).
  
     0.476
Your Current Organism:
Micromonospora auratinigra
NCBI taxonomy Id: 261654
Other names: DSM 44815, JCM 12357, M. auratinigra, Micromonospora aurantionigra, Micromonospora auratinigra corrig. Thawai et al. 2004, Micromonospora sp. TT1-11, NBRC 101913, PCU 239, PCU:239, strain TT1-11
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