STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBT50696.1Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (280 aa)    
Predicted Functional Partners:
SBT43202.1
Amino acid adenylation domain-containing protein.
  
 0.944
SBT43204.1
Amino acid adenylation domain-containing protein.
  
 
 0.787
SBT50698.1
Cysteine synthase A.
       0.773
SBT51467.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.764
SBT48087.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.753
SBT51521.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.741
SBT42831.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.734
SBT42907.1
Enoyl-[acyl-carrier-protein] reductase [NADH].
  
 
  0.725
SBT44544.1
Glutamate synthase (NADH) large subunit.
    
  0.710
SBT40398.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.706
Your Current Organism:
Micromonospora auratinigra
NCBI taxonomy Id: 261654
Other names: DSM 44815, JCM 12357, M. auratinigra, Micromonospora aurantionigra, Micromonospora auratinigra corrig. Thawai et al. 2004, Micromonospora sp. TT1-11, NBRC 101913, PCU 239, PCU:239, strain TT1-11
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