STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBT52255.1Uncharacterized conserved protein, DUF58 family, contains vWF domain. (436 aa)    
Predicted Functional Partners:
SBT52263.1
Domain of unknown function (DUF4350).
 
    0.979
SBT52260.1
MoxR-like ATPase.
 
    0.965
SBT52264.1
Protein of unknown function (DUF4129).
 
    0.955
SBT52266.1
Hypothetical protein.
       0.902
SBT52253.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
  
 0.827
SBT52252.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.787
SBT52268.1
Two-component system, OmpR family, response regulator MtrA.
       0.699
SBT52270.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
       0.652
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
      
 0.643
egtD
L-histidine Nalpha-methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
      
 0.642
Your Current Organism:
Micromonospora auratinigra
NCBI taxonomy Id: 261654
Other names: DSM 44815, JCM 12357, M. auratinigra, Micromonospora aurantionigra, Micromonospora auratinigra corrig. Thawai et al. 2004, Micromonospora sp. TT1-11, NBRC 101913, PCU 239, PCU:239, strain TT1-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.