STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH02706.1Capsular exopolysaccharide family. (779 aa)    
Predicted Functional Partners:
SDH02671.1
Polysaccharide export outer membrane protein.
 0.999
SDH87838.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.997
SDH57460.1
Polysaccharide export outer membrane protein.
 0.995
SDH86348.1
Protein involved in gliding motility EpsA.
 0.990
SDH86404.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.933
SDH57675.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.926
SDG74918.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
 
 0.917
SDH57505.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.838
SDG75551.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting).
  
 
 0.807
SDH73658.1
Polysaccharide biosynthesis protein.
  
 
 0.807
Your Current Organism:
Winogradskyella thalassocola
NCBI taxonomy Id: 262004
Other names: Bacteroidetes bacterium KMM 3907, DSM 15363, KCTC 12221, KMM 3907, LMG 22492, LMG:22492, W. thalassocola, Winogradskyella thalassocola Nedashkovskaya et al. 2005 emend. Nedashkovskaya et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.