STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG78085.1Sialate O-acetylesterase. (499 aa)    
Predicted Functional Partners:
SDG78201.1
Por secretion system C-terminal sorting domain-containing protein.
 
 
   0.760
SDG78158.1
Acetyl esterase/lipase.
    
  0.751
SDG77818.1
Hypothetical protein.
  
  0.733
SDG78128.1
Hypothetical protein.
    
  0.729
SDG78053.1
Alpha-L-rhamnosidase N-terminal domain-containing protein.
 
 
  0.727
SDG78009.1
Cellobiose phosphorylase.
 
  
 0.712
SDG77963.1
MFS/sugar transport protein.
 
     0.691
SDG92434.1
Acetyl esterase/lipase.
  
  
  0.691
SDG70565.1
Arylsulfatase A.
  
  
  0.685
SDG92772.1
Pectate lyase superfamily protein; Belongs to the glycosyl hydrolase 28 family.
  
  0.683
Your Current Organism:
Winogradskyella thalassocola
NCBI taxonomy Id: 262004
Other names: Bacteroidetes bacterium KMM 3907, DSM 15363, KCTC 12221, KMM 3907, LMG 22492, LMG:22492, W. thalassocola, Winogradskyella thalassocola Nedashkovskaya et al. 2005 emend. Nedashkovskaya et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.