Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG81323.1 | SDG81363.1 | SAMN04489796_101656 | SAMN04489796_101657 | Outer membrane protein OmpA. | Type IX secretion system membrane protein, PorP/SprF family. | 0.930 |
SDG81323.1 | SDG81400.1 | SAMN04489796_101656 | SAMN04489796_101658 | Outer membrane protein OmpA. | Fibronectin type III domain-containing protein. | 0.889 |
SDG81323.1 | SDG83392.1 | SAMN04489796_101656 | SAMN04489796_101711 | Outer membrane protein OmpA. | Gliding motility-associated C-terminal domain-containing protein. | 0.709 |
SDG81323.1 | SDG86400.1 | SAMN04489796_101656 | SAMN04489796_101793 | Outer membrane protein OmpA. | Gliding motility-associated lipoprotein GldD. | 0.416 |
SDG81323.1 | SDH26552.1 | SAMN04489796_101656 | SAMN04489796_10271 | Outer membrane protein OmpA. | WD40-like Beta Propeller Repeat. | 0.610 |
SDG81323.1 | SDH33162.1 | SAMN04489796_101656 | SAMN04489796_102343 | Outer membrane protein OmpA. | Tetratricopeptide repeat-containing protein. | 0.890 |
SDG81323.1 | SDH33215.1 | SAMN04489796_101656 | SAMN04489796_102344 | Outer membrane protein OmpA. | Gliding motility-associated C-terminal domain-containing protein. | 0.687 |
SDG81323.1 | SDH97338.1 | SAMN04489796_101656 | SAMN04489796_10616 | Outer membrane protein OmpA. | Outer membrane protein OmpA. | 0.576 |
SDG81323.1 | SDI61537.1 | SAMN04489796_101656 | SAMN04489796_11513 | Outer membrane protein OmpA. | WD40-like Beta Propeller Repeat. | 0.533 |
SDG81323.1 | SDI65827.1 | SAMN04489796_101656 | SAMN04489796_1251 | Outer membrane protein OmpA. | Hypothetical protein. | 0.652 |
SDG81363.1 | SDG81323.1 | SAMN04489796_101657 | SAMN04489796_101656 | Type IX secretion system membrane protein, PorP/SprF family. | Outer membrane protein OmpA. | 0.930 |
SDG81363.1 | SDG81400.1 | SAMN04489796_101657 | SAMN04489796_101658 | Type IX secretion system membrane protein, PorP/SprF family. | Fibronectin type III domain-containing protein. | 0.740 |
SDG81363.1 | SDG83392.1 | SAMN04489796_101657 | SAMN04489796_101711 | Type IX secretion system membrane protein, PorP/SprF family. | Gliding motility-associated C-terminal domain-containing protein. | 0.684 |
SDG81363.1 | SDG86400.1 | SAMN04489796_101657 | SAMN04489796_101793 | Type IX secretion system membrane protein, PorP/SprF family. | Gliding motility-associated lipoprotein GldD. | 0.658 |
SDG81363.1 | SDH26552.1 | SAMN04489796_101657 | SAMN04489796_10271 | Type IX secretion system membrane protein, PorP/SprF family. | WD40-like Beta Propeller Repeat. | 0.734 |
SDG81363.1 | SDH33162.1 | SAMN04489796_101657 | SAMN04489796_102343 | Type IX secretion system membrane protein, PorP/SprF family. | Tetratricopeptide repeat-containing protein. | 0.743 |
SDG81363.1 | SDH33215.1 | SAMN04489796_101657 | SAMN04489796_102344 | Type IX secretion system membrane protein, PorP/SprF family. | Gliding motility-associated C-terminal domain-containing protein. | 0.695 |
SDG81363.1 | SDH97338.1 | SAMN04489796_101657 | SAMN04489796_10616 | Type IX secretion system membrane protein, PorP/SprF family. | Outer membrane protein OmpA. | 0.654 |
SDG81363.1 | SDI61537.1 | SAMN04489796_101657 | SAMN04489796_11513 | Type IX secretion system membrane protein, PorP/SprF family. | WD40-like Beta Propeller Repeat. | 0.706 |
SDG81363.1 | SDI65827.1 | SAMN04489796_101657 | SAMN04489796_1251 | Type IX secretion system membrane protein, PorP/SprF family. | Hypothetical protein. | 0.640 |
page 1 of 3