STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH36090.1MoxR-like ATPase. (317 aa)    
Predicted Functional Partners:
SDH36009.1
Hypothetical protein.
       0.786
SDH36047.1
Periplasmic chaperone for outer membrane proteins SurA.
       0.786
SDG90186.1
Protein of unknown function DUF58.
 
  
 0.748
SDG84274.1
Protein of unknown function DUF58.
  
 0.705
SDH35965.1
Peptidyl-prolyl cis-trans isomerase SurA.
       0.652
SDG84349.1
Ca-activated chloride channel family protein.
 
 
  0.500
SDG84384.1
Ca-activated chloride channel family protein.
 
 
  0.456
SDG72311.1
Putative membrane protein.
     
  0.408
Your Current Organism:
Winogradskyella thalassocola
NCBI taxonomy Id: 262004
Other names: Bacteroidetes bacterium KMM 3907, DSM 15363, KCTC 12221, KMM 3907, LMG 22492, LMG:22492, W. thalassocola, Winogradskyella thalassocola Nedashkovskaya et al. 2005 emend. Nedashkovskaya et al. 2012
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.