STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH63180.1Hypothetical protein. (332 aa)    
Predicted Functional Partners:
SDH63118.1
Nitroreductase.
       0.751
SDH63229.1
NADP-dependent alcohol dehydrogenase.
     
 0.733
SDH63066.1
Hypothetical protein.
  
    0.715
SDH63011.1
DNA-binding transcriptional regulator, AcrR family.
       0.705
SDI65646.1
Aldo/keto reductase.
   
 
 0.606
SDH63269.1
Putative intracellular protease/amidase.
 
    0.576
SDH29350.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.458
SDH62952.1
Na+/H+ antiporter NhaC.
       0.452
SDI53508.1
Amino acid adenylation domain-containing protein.
    
 
 0.441
Your Current Organism:
Winogradskyella thalassocola
NCBI taxonomy Id: 262004
Other names: Bacteroidetes bacterium KMM 3907, DSM 15363, KCTC 12221, KMM 3907, LMG 22492, LMG:22492, W. thalassocola, Winogradskyella thalassocola Nedashkovskaya et al. 2005 emend. Nedashkovskaya et al. 2012
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.