STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH77499.1Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. (189 aa)    
Predicted Functional Partners:
SDH77462.1
DNA-binding transcriptional regulator, MarR family.
 
     0.826
SDH79820.1
ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family.
  
     0.587
SDI23803.1
Hypothetical protein.
  
     0.479
SDG60130.1
Cytochrome c2.
  
     0.434
SDH57324.1
L-proline dehydrogenase.
  
     0.423
SDH77535.1
Anthranilate synthase component 1.
       0.421
SDG60091.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
  
     0.419
SDI57147.1
Glycosyl hydrolases family 2, TIM barrel domain.
  
     0.415
Your Current Organism:
Winogradskyella thalassocola
NCBI taxonomy Id: 262004
Other names: Bacteroidetes bacterium KMM 3907, DSM 15363, KCTC 12221, KMM 3907, LMG 22492, LMG:22492, W. thalassocola, Winogradskyella thalassocola Nedashkovskaya et al. 2005 emend. Nedashkovskaya et al. 2012
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