STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH87700.1Glycosyl transferases group 1. (375 aa)    
Predicted Functional Partners:
SDH87766.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.917
SDH87730.1
O-antigen ligase like membrane protein.
 
 
  0.885
SDH87627.1
Glycosyltransferase, GT2 family.
 
    0.851
SDH87667.1
Phosphatidylinositol alpha-1,6-mannosyltransferase.
 
     0.851
SDH87468.1
Colanic acid/amylovoran biosynthesis glycosyltransferase.
 
     0.786
SDH87838.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.712
SDH87361.1
Colanic acid/amylovoran biosynthesis glycosyltransferase.
 
     0.675
SDH87331.1
Colanic acid/amylovoran biosynthesis glycosyltransferase.
 
     0.625
SDH86348.1
Protein involved in gliding motility EpsA.
  
 
  0.594
SDH86943.1
Glycosyltransferase, GT2 family.
 
 
 0.584
Your Current Organism:
Winogradskyella thalassocola
NCBI taxonomy Id: 262004
Other names: Bacteroidetes bacterium KMM 3907, DSM 15363, KCTC 12221, KMM 3907, LMG 22492, LMG:22492, W. thalassocola, Winogradskyella thalassocola Nedashkovskaya et al. 2005 emend. Nedashkovskaya et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.