STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI01619.1Por secretion system C-terminal sorting domain-containing protein. (1273 aa)    
Predicted Functional Partners:
SDI45065.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
  0.810
SDG80506.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
  0.776
SDH33215.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
  0.704
SDH74059.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
  0.695
SDG98592.1
Lysophospholipase L1.
  
  0.685
SDG93515.1
SusE outer membrane protein.
  
 
  0.655
SDG70672.1
Lysophospholipase L1.
  
 0.646
SDH53116.1
AAA domain-containing protein.
  
     0.646
SDI16398.1
Por secretion system C-terminal sorting domain-containing protein.
  
   
 0.641
SDG98687.1
Sialate O-acetylesterase.
   
  0.628
Your Current Organism:
Winogradskyella thalassocola
NCBI taxonomy Id: 262004
Other names: Bacteroidetes bacterium KMM 3907, DSM 15363, KCTC 12221, KMM 3907, LMG 22492, LMG:22492, W. thalassocola, Winogradskyella thalassocola Nedashkovskaya et al. 2005 emend. Nedashkovskaya et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.