STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI02097.1Hypothetical protein. (120 aa)    
Predicted Functional Partners:
SDI61581.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.664
SDH72790.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
  
    0.562
SDH92903.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
  
    0.562
SDG96545.1
Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family.
    
  0.553
SDH36524.1
DNA-binding transcriptional regulator, MerR family.
  
  
  0.552
SDH33102.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.545
SDI02057.1
Outer membrane receptor proteins, mostly Fe transport.
       0.539
SDG81363.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.526
SDH97375.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.513
SDG63883.1
5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.
  
  
  0.464
Your Current Organism:
Winogradskyella thalassocola
NCBI taxonomy Id: 262004
Other names: Bacteroidetes bacterium KMM 3907, DSM 15363, KCTC 12221, KMM 3907, LMG 22492, LMG:22492, W. thalassocola, Winogradskyella thalassocola Nedashkovskaya et al. 2005 emend. Nedashkovskaya et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.