STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI15870.1Uncharacterized conserved protein, Tic20 family. (188 aa)    
Predicted Functional Partners:
SDI15903.1
CAAX protease self-immunity.
 
     0.740
SDI27891.1
Serine/threonine-protein kinase HipA.
  
 
 0.692
SDI02520.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
 0.690
SDI40172.1
Regulatory protein, luxR family.
  
  0.639
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
 
 0.586
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
 0.564
SDI15942.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
    
 0.527
SDH61005.1
Conserved hypothetical protein, HNE_0200 family.
  
 
   0.525
SDH74752.1
CarboxypepD_reg-like domain-containing protein.
  
    0.518
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
    
  0.511
Your Current Organism:
Winogradskyella thalassocola
NCBI taxonomy Id: 262004
Other names: Bacteroidetes bacterium KMM 3907, DSM 15363, KCTC 12221, KMM 3907, LMG 22492, LMG:22492, W. thalassocola, Winogradskyella thalassocola Nedashkovskaya et al. 2005 emend. Nedashkovskaya et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.